Publications

These publications have been cited more than 7200 times, excluding self-citations, with an h-index of 44 or higher. (Source: Web of Science, data current to Feb 23, 2022.)

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2024
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K.D. Krause^, K. Rees^, G.H. Darwish^, J. Bernal Escalante^, W.R. Algar* Bait and Cleave: Exosite-Binding Peptides on Quantum Dots Selectively Accelerate Protease Activity for Sensing with Enhanced Sensitivity
ACS Nano 18 (2024) 17018-17030.

2023
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K.D. Krause^, K. Rees^, W.R. Algar* Assessing the Steric Impact of Surface Ligands on the Proteolytic Turnover of Quantum Dot-Peptide Conjugates
ACS Appl. Mater. Inter. 15 (2023) 57799-57811.

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G.H. Darwish^, D.V. Baker^, W.R. Algar* Maximizing Fluorescence Color Multiplexing within the RGB Color Space Using Supra-Quantum Dot Assemblies
ACS Sensors 8 (2023) 4686-4695.

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R. Gupta^, Y. Wang^, G.H. Darwish^, J. Poisson, A. Szwarczewski^, S. Kim^, C. Traaseth^, Z.M. Hudson, W.R. Algar* Semiconducting Polymer Dots Directly Stabilized with Serum Albumin: Preparation, Characterization and Cellular Immunolabeling
ACS Appl. Mater. Inter. 15 (2023) 55456-55465.

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S. Kanani^, H.Y. Tsai^, W.R. Algar* Quantitative and Multiplexed Chopper-Based Time-Gated Imaging for Bioanalysis on a Smartphone
Anal. Chem. 95 (2023) 13258–13265.

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H.Y. Tsai^, C.J.T. Robidillo, G.K. Matharu, K. O'Connor, I.T. Cheong, C. Ni, J.G.C. Veinot, W.R. Algar* Spectrotemporal characterization of photoluminescent silicon nanocrystals and their energy transfer to dyes
Nanoscale 15 (2023) 12492-12505.

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G.H. Darwish^, M. Massey^, G. Daudet, L.G. Alde, W.R. Algar* Tetrameric Antibody Complexes and Affinity Tag Peptides for the Selective Immobilization and Imaging of Single Quantum Dots
Bioconjugate Chem. 34 (2023) 1258-1270.

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K. Rees^, G.H. Darwish^, W.R. Algar* Dextran-Functionalized Super-Nanoparticle Assemblies of Quantum Dots for Enhanced Cellular Immunolabeling and Imaging
ACS Appl. Mater. Inter. 15 (2023) 18672-18684.

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W.R. Algar, A. Szwarczewski^, M. Massey^
Are We There Yet? Intracellular Sensing with Luminescent Nanoparticles and FRET
Anal. Chem. 95 (2023) 551-559.

2022
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W.R. Algar, T. Albrecht, K. Faulds, J.J. Zhu
Analytical Nanoscience
Analyst 147 (2022) 765-766.

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R. Gupta^, G.H. Darwish^, W.R. Algar*
Complex Photobleaching Behavior of Semiconducting Polymer Dots
J. Phys. Chem. C 126 (2022) 20960-20974.

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W.R. Algar, N. Elouazizi, J.J. Stewart, E.J. Maxwell, T. Tan, Z. Zhang, R. Stoodley, J.R. Rodríguez Núñez, A.S. Terpstra, J.G. Wickenden
The Alchemy Project: A Personalized, Flexible, and Scalable Active Learning Platform to Help Foster Expert-Like Thinking in Chemistry
J. Chem. Ed. 99 (2022) 3104-3113.

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W.R. Algar, K.D. Krause^
Developing FRET Networks for Sensing
Annu. Rev. Anal. Chem. 15 (2022) 17-36.

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H.-Y. Tsai^, W.R. Algar*
A Dendrimer-Based Time-Gated Concentric FRET Configuration for Multiplexed Sensing
ACS Nano 16 (2022) 8150-8160.

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Z. Xiao^, G.H. Darwish^, K. Susumu, I.L. Medintz, W.R. Algar*
Prototype Smartphone-Based Device for Flow Cytometry with Immunolabeling via Supra-nanoparticle Assemblies of Quantum Dots
ACS Meas. Sci. Au 2 (2022) 57-66.

2021
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D.M. Mayder, C.M. Tonge, G.D. Nguyen, M.V. Tran^, G. Tom, G.H. Darwish^, R. Gupta^, K. Lix^, S. Kamal, W.R. Algar, S.A. Burke, Z.M. Hudson* Polymer Dotss with Enhanced Photostability, Quantum Yield, and Two-Photon Cross-Section using Structurally Constrained Deep-Blue Fluorophores
J. Am. Chem. Soc 143 (2021)16976-16992.

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C.J. Christopherson, N.R. Paisley, Z. Xiao^, W.R. Algar, Z.M. Hudson*
Red-Emissive Cell-Penetrating Polymer Dots Exhibiting Thermally Activated Delayed Fluorescence for Cellular Imaging
J. Am. Chem. Soc 143 (2021)13342-13349.

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W.R. Algar, M. Massey^, K. Rees^, R. Higgins^, K.D. Krause^, G.H. Darwish^, W.J. Peveler, Z. Xiao^, H.Y. Tsai^, R. Gupta^, K. Lix^, M.V. Tran^, H. Kim^
Photoluminescent Nanoparticles for Chemical and Biological Analysis and Imaging
Chem. Rev. 121 (2021) 9243-9358.

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N.R. Paisley, S.V. Halldorson, M.V. Tran^, R. Gupta^, S. Kamal, W.R. Algar, Z.M. Hudson*
Near-Infrared-Emitting Boron-Difluoride-Curcuminoid-Based Polymers Exhibiting Thermally Activated Delayed Fluorescence as Biological Imaging Probes
Angew. Chem. Int. Ed. 60 (2021) 18630-18638.

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K.D. Krause^, H.Y. Tsai^, K. Rees^, H. Kim^, W.R. Algar*
Preparation and Characterization of Quantum Dot-Peptide Conjugates Based on Polyhistidine Tags
Meth. Mol. Biol. 2355 (2021) 15-218.

2020
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H. Kim^, M.V. Tran^, E. Petryayeva, O. Solodova, K. Susumu, E. Oh, I.L. Medintz, W.R. Algar*
Affinity Immobilization of Semiconductor Quantum Dots and Metal Nanoparticles on Cellulose Paper Substrates
ACS Appl. Mater. Inter. 12 (2020) 53462-43474.

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K. Lix, K.D. Krause, H. Kim, W.R. Algar*
Investigation of the Energy Transfer Mechanism Between Semiconducting Polymer Dots and Organic Dyes
J. Phys. Chem. C. 124 (2020) 17387-17400.

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G.H. Darwish, J. Asselin, M.V. Tran, R. Gupta, H. Kim, D. Boudreau, W.R. Algar*
Fully Self-Assembled Silica Nanoparticle-Semiconductor Quantum Dot Supra-Nanoparticles and Immunoconjugates for Enhanced Cellular Imaging by Microscopy and Smartphone Camera
ACS Appl. Mater. Inter. 12 (2020) 33530-33540.

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W.R. Algar*
Heroes or Villains? How Nontraditional Luminescent Materials Do and Do Not Enhance Bioanalysis and Imaging
Chem. Mater. 32 (2020) 4863-4883.

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Y. Wang, H. Wang, M.V. Tran, W.R. Algar, H. Li*
Yellow fluorescent protein-based label-free tension sensors for monitoring integrin tension
Chem. Commun. 56 (2020) 5556-5559.

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K. Rees, M. Massey, M.V. Tran, W.R. Algar*
Dextran-Functionalized Quantum Dot Immunoconjugates for Cellular Imaging
Meth. Mol. Biol. 2135 (2020) 143-168.

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K. Rees, M.V. Tran, M. Massey, H. Kim, K.D. Krause, W.R. Algar
Dextran-Functionalized Semiconductor Quantum Dot Bioconjugates for Bioanalysis and Imaging
Bioconjugate Chem. 31 (2020) 861-874.

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M.C. dos Santos, W.R. Algar, I.L. Medintz, N. Hildebrandt*
Quantum Dots for Förster Resonance Energy Transfer (FRET)
Trends Anal. Chem. 125 (2020) 115819.

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C. Tonge, N. Paisley, A. Polgar, K. Lix, W.R Algar, Z.M. Hudson*
Color-Tunable Thermally-Activated Delayed Fluorescence in Oxadiazole-Based Acrylic Copolymers: Photophysical Properties and Applications in Ratiometric Oxygen Sensing
ACS Appl. Mater. Inter. 12 (2020) 6525-6535.

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K. Lix, M.V. Tran, M. Massey, K. Rees, E.R. Sauvé, Z.M. Hudson, W.R. Algar*
Dextran-Functionalization of Semiconducting Polymer Dots and Conjugation with Tetrameric Antibody Complexes for Bioanalysis and Imaging
ACS Appl. Biomater. 3 (2020) 432-440.

2019
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M.V. Tran, K. Susumu, I.L. Medintz, W.R. Algar*
Supraparticle Assemblies of Magnetic Nanoparticles and Quantum Dots for Selective Cell Isolation and Counting on a Smartphone-Based Imaging Platform
Anal. Chem. 91 (2019) 11963-11971

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R. Gupta, W.J. Peveler, K. Lix, W.R. Algar*
Comparison of Semiconducting Polymer Dots and Semiconductor Quantum Dots for Smartphone-Based Fluorescence Assays
Anal. Chem. 91 (2019) 10955-10960

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H.Y. Tsai, H. Kim, M. Massey, K.D. Krause W.R. Algar*
Concentric FRET: Nanoparticle-Assembled Networks of Competitive and Sequential Förster Resonance Energy Transfer Pathways
Meth. Appl. Fluoresc. 7 (2019) 042001

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W.J. Peveler, H. Jia, T. Jeen, K. Rees, T.J. Macdonald, W.K. Chio, S. Moorthy, Z. Xia, I.P. Parkin, C.J. Carmalt, W.R. Algar, T.C. Lee
Cucurbituril-mediated quantum dot aggregates formed by aqueous self-assembly for sensing applications
Chem. Commun. 55 (2019) 5495-5498

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W.R. Algar, N. Hildebrandt, S. Vogel, I.L. Medintz*
FRET as a biomolecular research tool--understanding its potential while avoiding pitfalls
Nature Meth. 16 (2019) 815-829.

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D. Bajj, M.V. Tran, H.Y. Tsai, H. Kim, N. Paisley, W.R. Algar, Z.M. Hudson
Fluorescent Heterotelechelic Single-Chain Polymer Nanoparticles: Synthesis, Spectroscopy and Cellular Imaging
ACS Appl. Nano Mater. 2 (2019) 898-909.

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A. Sangtani, E. Petryayeva, K. Susumu, E. Oh, A.L. Huston, G. Lasarte-Aragones, I.L. Medintz, W.R. Algar, J.B. Delehanty*
Nanoparticle-Peptide-Drug Bioconjugates for Unassisted Defeat of Multidrug Resistance in Cancer
Bioconjugate Chem. 30 (2019) 525-530.

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T. Jeen, M. Massey, W.J. Peveler, J. Asselin, W.R. Algar*
Small Surface, Big Effects, and Big Challenges: Toward Understanding Enzymatic Activity at the Inorganic Nanoparticle-Substrate Interface
Langmuir 35 (2019) 7067-7091

2018
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T. Jeen, W.R. Algar*
Mimicking Cell Surface Enhancement of Protease Activity on the Surface of a Quantum Dot Nanoparticle
Bioconjugate Chem. 29 (2018) 3738-3792

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W.J. Peveler, W.R. Algar*
More than a Light Switch: Engineering Unconventional Fluorescent Configurations for Biological Sensing
ACS Chem. Biol. 13 (2018) 1752–1766

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E. Oh, J.B. Delehanty, C.A. Kluug, K. Susmu, W.R. Algar, R. Goswami, I.L. Medintz
Utility of PEGylated diothiolane ligands for direct synthesis of water-soluble Au, Ag, Pt, Pd, Cu and AuPt nanoparticles
Chem. Commun. 54 (2018) 1956-1959

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H. Kim, T. Jeen, M.V. Tran, W.R. Algar*
Polyacrylamide gel electrophoresis of semiconductor quantum dots and their bioconjugates: Characterization and insights from spectrofluorimetric detection
Analyst 143 (2018) 1104-1116

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A. Sangtani, E. Petryayeva, M. Wu, K. Susumu, E. Oh, A.L. Huston, G. Lasarte-Aragones, I.L. Medintz, W.R. Algar, J.B. Delehanty*
Intracellularly-Actuated Quantum Dot-Peptide-Doxorubicin Nanobioconjugates for Controlled Drug Delivery via the Endocytic Pathway
Bioconjugate Chem. 29 (2018) 136-148

2017
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J.S. Lee, H. Kim, W.R. Algar
Thiol Ligand-Catalyzed Quenching and Etching in Mixtures of Colloidal Quantum Dots and Silver Nanoparticles
J. Phys. Chem. C 121 (2017) 28566-28575

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J. Zhang, W.R. Scott, F. Gabel, M. Wu, R. Desmond, J.H. Bae, G. Zaccai, W.R. Algar, S.K. Straus
On the quest for the elusive mechanism of action of daptomycin: binding, fusion, and oligomerization
Biochim. Biophys. Acta - Proteins and Proteomics 1865 (2017) 1490-1499

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E. Petryayeva, T. Jeen, W.R. Algar*
Optimization and Changes in the Mode of Proteolytic Turnover of Quantum Dot-Peptide Substrate Conjugates Through Moderation of Interfacial Adsorption
ACS Appl. Mater. Inter. 9 (2017) 30359-30372

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M. Massey, I.L. Medintz, M.G. Ancona, W.R. Algar*
Time-Gated FRET and DNA-Based Photonic Molecular Logic Gates: AND, OR, NAND and NOR
ACS Sensors 2 (2017) 1205-1214

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M. Massey^, H. Kim^, E. Conroy, W.R. Algar*
Expanded Quantum Dot-Based Concentric Förster Resonance Energy Transfer: Adding and Characterizing Energy-Transfer Pathways for Triply Multiplexed Biosensing
J. Phys. Chem. C 121 (2017) 13345–13356

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W.R. Algar, A. Khachatrian, J.S. Melinger, A. Huston, M.H. Stewart, K. Susumu, J.B. Blanco-Canosa, E. Oh, P.E. Dawson, I.L. Medintz
Concurrent Modulation of Quantum Dot Photoluminescence Using a Combination of Charge Transfer and FRET: Competitive Quenching and Multiplexed Biosensing Modality
J. Am. Chem. Soc. 139 (2017) 363-372

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M. Massey, J.J. Li, W.R. Algar*
Multifunctional Concentric FRET-Quantum Dot Probes for Tracking and Imaging of Proteolytic Activity
Meth. Mol. Biol. 1530 (2017) 63-97

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N. Hildebrandt, C.M. Spillmann, W.R. Algar, T. Pons, M.H. Stewart, E. Oh, K. Susumu, S.A. Díaz, J.B. Delehanty, I.L. Medintz*
Energy Transfer with Semiconductor Quantum Dot Bioconjugates: A Versatile Platform for Biosensing, Energy Harvesting, and Related Applications
Chem. Rev. 117 (2017) 536-711

2016
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E.M. Conroy, J.J. Li, H. Kim, W.R. Algar*
Self-Quenching and Homo-FRET in Hetero-FRET Assemblies with Quantum Dot Donors and Multiple Dye Acceptors
J. Phys. Chem. C 120 (2016) 17817-17828

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J.J. Li, W.R. Algar*
A Long Wavelength Quantum Dot-Concentric FRET Configuration and Its Application in a Toehold-Mediated Strand Displacement Hybridization
Analyst 141 (2016) 3636- 3647

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E. Petryayeva, W.R. Algar*
A Job for Quantum Dots: Use of a Smartphone and 3D-Printed Accessory for All-In-One Excitation and Imaging of Photoluminescence
Anal. Bioanal. Chem. 408 (2016) 2913-2925

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K. Lix, W.R. Algar*
Investigation of energy transfer between semiconducting polymer dot donors and hydrophilic and hydrophobic Cy5 acceptors
Proc. SPIE 9930 (2016) 993007

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W.R. Algar, C.A.G. De Jong, E.J. Maxwell, C.G. Atkins
Demonstration of the Spectrophotometric Complementary Color Wheel Using LEDs and Indicator Dyes
J. Chem. Ed. 93 (2016) 162-165

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J.J. Wang, J.R. Rodríguez Núñez, E.J. Maxwell, W.R. Algar
Build Your Own Photometer: A Guided-Inquiry Experiment to Introduce Analytical Instrumentation
J. Chem. Ed. 93 (2016) 166-171

2015
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M. Massey, M.G. Ancona, I.L. Medintz, W.R. Algar*
Time-Gated Beacons for Nucleic Acid Hybridization Assays in Complex Matrices
Anal. Chem. 87 (2015) 11923–11931

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M. Wu^, M. Massey^, E. Petryayeva, W.R. Algar*
Energy Transfer Pathways in a Quantum Dot-Based Concentric FRET Configuration
J. Phys. Chem. C. 119 (2015) 26183-26195

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M. Wu, W.R. Algar*
Concentric Förster Resonance Energy Transfer Imaging
Anal. Chem. 87 (2015) 8078-8083

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E. Petryayeva, W.R. Algar*
FRET-based Bioassays in Serum and Whole Blood with a Smartphone and Quantum Dots
Analyst 140 (2015) 4037-4045

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M. Massey, M.G. Ancona, I.L. Medintz, W.R. Algar*
Time-Gated DNA Photonic Wires with Förster Resonance Energy Transfer Cascades Initiated by a Luminescent Terbium Donor
ACS Photonics 2 (2015) 639-652

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Petryayeva, W.R. Algar*
Toward Point-of-Care Diagnostics with Consumer Electronic Devices: The Expanding Role of Nanoparticles
RSC Advances 5 (2015) 22256-22282

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E. Petryayeva, W.R. Algar*
Integrated smartphone imaging of quantum dot photoluminescence and Förster resonance energy transfer
Proc. SPIE 9482 (2015) 94820L

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M. Wu, W.R. Algar*
Acceleration of Proteolytic Activity Associated with Selection of Thiol Ligand Coatings on Quantum Dots
ACS Appl. Mater. Inter. 7 (2015) 2535-2454

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M. Massey, M. Wu, E. Conroy, W.R. Algar*
Mind Your P’s and Q’s: The Coming of Age of Semiconducting Polymer Dots and Semiconductor Quantum Dots in Biological Applications
Cur. Opin. Biotechnol. 34 (2015) 30-40

2014
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M. Wu, E. Petryayeva, W.R. Algar*
A Quantum Dot-Based Concentric FRET Configuration for the Parallel Detection of Protease Activity and Concentration
Anal. Chem. 86 (2014) 11181-11188

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W.R. Algar, M.H. Stewart, A.M. Scott, W.J. Moon, I.L. Medintz
Quantum Dots as Platforms for Charge Transfer-Based Biosensing: Challenges and Opportunities
J. Mater. Chem. B 2 (2014) 7816-7827

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N. Hildebrandt, K.D. Wegner, W.R. Algar
Luminescent terbium complexes: Superior Förster resonance energy transfer donors for flexible and sensitive multiplexed biosensing
Coord. Chem. Rev. 273-274 (2014) 125-138

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H. Kim^, C.Y.N. Ng^, WR Algar*
A Quantum Dot-Based Multi-Donor Concentric FRET System and its Application to Biosensing Using an Excitation Ratio
Langmuir 30 (2014) 5676-5685

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M. Wu, E. Petryayeva, I.L. Medintz, W.R. Algar*
Quantitative measurement of proteolytic rates with quantum dot-peptide substrate conjugates and Förster resonance energy transfer
Meth. Mol. Biol. 1199 (2014) 215-239

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E. Petryayeva, W.R. Algar*
Multiplexed Homogeneous Assays of Proteolytic Activity Using a Smartphone and Quantum Dots
Anal. Chem. 86 (2014) 3195-3202

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H. Kim, E. Petryayeva, W.R. Algar*
Enhancement of Quantum Dot Förster Resonance Energy Transfer within Paper Matrices and Application to Proteolytic Assays
IEEE J. Sel. Top. Quant. Electron. 20 (2014) 7300211

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B.J. Johnson, W.R. Algar, A.P. Malanoski, M.G. Ancona, I.L. Medintz*
Understanding enzymatic acceleration at nanoparticle interfaces: Approaches and challenges
Nano Today 9 (2014) 102-131

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M. Massey, W.R. Algar*
Evaluation of thiazole intercalating dyes as acceptors for quantum dot donors in Förster resonance energy transfer
Proc. SPIE 9107 (2014) 91070W

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J.B. Blanco-Canosa^, M. Wu^, K. Susumu, E. Petryayeva, T.L. Jennings, P.E. Dawson, W.R. Algar, I.L. Medintz*
Recent Progress in the Bioconjugation of Quantum Dots
Coord. Chem. Rev. 263-264 (2014) 101-137

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W.R. Algar, H. Kim, I.L. Medintz, N. Hildebrandt
Emerging Non-Traditional Förster Resonance Energy Transfer Configurations with Semiconductor Quantum Dots: Investigations and Applications
Coord. Chem. Rev. 263-264 (2014) 65-85

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M.O. Noor, E. Petryayeva, A.J. Tavares, U. Uddayasankar, WR Algar, U.J. Krull
Building from the "Ground" Up: Developing Interfacial Chemistry for Solid-Phase Nucleic Acid Hybridization Assays Based on Quantum Dots and Fluorescence Resonance Energy Transfer
Coord. Chem. Rev. 263-264 (2014) 25-52

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E. Conroy, W.R. Algar*
Evaluation of quantum dot-based concentric FRET configurations with a fluorescent dye and dark quencher for multiplexed bioanalyses
Proc. SPIE 8955 (2014) 89550U

2013
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J.C. Claussen, W.R. Algar, N. Hildebrandt, K. Susumu, M.G. Ancona, I.L. Medintz*
Biophotonic logic devices based on quantum dots and temporally-staggered Förster energy transfer relays
Nanoscale 5 (2013) 9489-9505

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E. Petryayeva, W.R. Algar*
Proteolytic Assays on Quantum Dot-Modified Paper Substrates Using Simple Optical Readout Platforms
Anal. Chem. 85 (2013) 8817-8825

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J.C. Claussen, W.R. Algar, N. Hildebrandt, K. Susumu, M.G. Ancona, I.L. Medintz*
Enhancing molecular logic through modulation of temporal and spatial constraints with quantum dot-based systems that use fluorescent (Förster) resonance energy transfer
Proc. SPIE 8817 (2013) 88170O

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W.R. Algar, I.L. Medintz
Concentric Energy Transfer with Quantum Dots for Multiplexed Biosensing
Nano Reviews 4 (2013) 22428

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E. Petryayeva, I.L. Medintz, W.R. Algar*
Quantum Dots in Bioanalysis: A Review of Applications Across Various Platforms for Fluorescence Spectroscopy and Imaging
Appl. Spectrosc. 67 (2013) 215-252

Pre-UBC

S. Buckhout-White, C.M. Spillmann, W.R. Algar, A. Khachatrian, J.S. Melinger, E.R. Goldman, M.G. Ancona, I.L. Medintz*
Assembling programmable FRET-based photonic networks using designer DNA scaffolds.
Nature Commun. 5 (2014) 5615

C.M. Spillmann, J. Naciri, W.R. Algar, I.L. Medintz, J.B. Delehanty*
Multifunctional Liquid Crystal Nanoparticles for Intracellular Fluorescent Imaging and Drug Discovery
ACS Nano 8 (2014) 6986-6997

A.M. Scott, W.R. Algar, M.H. Stewart, S. Trammell, J.B. Blanco-Canosa, P.E. Dawson, J.R. Deschamps, A. Huston, I.L. Medintz
Probing the Quenching of Quantum Dot Photoluminescence by Peptide-labeled Ruthenium(II) Complexes
J. Phys. Chem. C 118 (2014) 9239-9250

M.H. Stewart, A.L. Huston, A.M. Scott, E. Oh, W.R. Algar, J.R. Deschamps, K. Susumu, V. Jain, D.E. Prasuhn, J.B. Blanco-Canosa, P.E. Dawson, I.L. Medintz*
Competition between Forster Resonance Energy Transfer and Electron Transfer in Stoichiometrically Assembled Semiconductor Quantum Dot-Fullerene Conjugates
ACS Nano 7 (2013) 7101-7118

C.M. Spillmann, M.G. Ancona, S. Buckhout-White, W.R. Algar, M.H. Stewart, K. Susumu, A.L. Huston, E.R. Goldman, I.L. Medintz*
Achieving Effective Terminal Exciton Delivery in Quantum Dot Antenna-Sensitized Multistep DNA Photonic Wires
ACS Nano 7 (2013) 7101-7118

G. Anderson, R. Glaven, W.R. Algar, K. Susumu, M. Stewart, I.L. Medintz, E.R. Goldman*
Single Domain Antibody-Quantum Dot Conjugates for Ricin Detection by Both Fluoroimmunoassay and Surface Plasmon Resonance
Anal. Chim. Acta 786 (2013) 132-138

K. Boeneman Gemmill, J.B. Delehanty, J.B. Blanco-Canosa, K. Susumu, M. Stewart, E. Oh, A. Huston, G. Dawson, S. Ingale, R. Walters, M. Domowicz, J.R. Deschamps, W.R. Algar, S. DiMaggio, J. Manono, C. Spillmann, D. Thompson, T. Jennings, P.E. Dawson, I.L. Medintz*
Selecting Improved Peptidyl Motifs for Cytosolic Delivery of Disparate Protein and Nanoparticle Materials
ACS Nano 7 (2013) 3778-3786

K.E. Sapsford, W.R. Algar, L. Berti, K. Boeneman Gemmill, B.J. Casey, E. Oh, M.H. Stewart, I.L. Medintz*
Functionalizing Nanoparticles with Biological Molecules: Developing Chemistries that Facilitate Nanotechnology
Chem. Rev. 113 (2013) 1904-2074

E. Petryayeva, W.R. Algar, U.J. Krull*
Adapting Fluorescence Resonance Energy Transfer with Quantum Dot Donors for Solid-Phase Hybridization Assays in Microtiter Plate Format
Langmuir 29 (2013) 977-987

S. Buckhout-White, C. Spillmann, M. Ancona, W.R. Algar, M.H. Stewart, K. Susumu, A. Huston, E.R. Goldman, I.L. Medintz*
Improving Energy Transfer in QD-DNA Photonic Networks
Proc. SPIE 8817 (2013) 88170J

J.B. Delehanty, C.M. Spillmann, J. Naciri, W.R. Algar, B.R. Ratna, I.L. Medintz
Fluorescent Nanocolloids for Differential Labeling of the Endocytic Pathway and Drug Delivery Applications
Proc. SPIE 8595 (2013) 85951E

W.R. Algar, J.B. Blanco-Canosa, R.L. Manthe, K. Susumu, M.H. Stewart, P.E. Dawson, I.L. Medintz*
Synthesizing and Modifying Peptides for Chemoselective Ligation and Assembly as Quantum Dot-Peptide Bioconjugates
Meth. Mol. Biol. 1025 (2013) 47-73

W.R. Algar, M.G. Ancona, A.P. Malanoski, K. Susumu, I.L. Medintz
Assembly of a Concentric Förster Resonance Energy Transfer Relay on a Quantum Dot Scaffold: Characterization and Application to Multiplexed Sensing
ACS Nano 6 (2012) 11044-11058

W.R. Algar, A.P. Malanoski, K. Susumu, M.H. Stewart, N. Hildebrandt, I.L. Medintz
Multiplexed Tracking of Protease Activity Using a Single Color of Quantum Dot Vector and a Time-Gated Förster Resonance Energy Transfer Relay
Anal. Chem. 84 (2012) 10136-10146

J.B. Delehanty, K. Susumu, R.L. Manthe, W.R. Algar, I.L. Medintz
Active cellular sensing with quantum dots: Transitioning from research tool to reality; a review
Anal. Chim. Acta 750 (2012) 63-81

W.R. Algar, A. Malonoski, J.R. Deschamps, J.B. Blanco-Canosa, K. Susumu, M.H. Stewart, B.J. Johnson, P.E. Dawson, I.L. Medintz*
Proteolytic Activity at Quantum Dot-Conjugates: Kinetic Analysis Reveals Enhanced Enzyme Activity and Localized Interfacial Hopping
Nano Lett. 12 (2012) 3793-3802

W.R. Algar, K.D. Wegner, A.L. Huston, J.B. Blanco-Canosa, M.H. Stewart, A. Armstrong, P.E. Dawson, N. Hildebrandt, I.L. Medintz*
Quantum Dots as Simultaneous Acceptors and Donors in Time-Gated Förster Resonance Energy Transfer Relays: Characterization and Biosensing
J. Am. Chem. Soc. 134 (2012) 1876-1891

A.J. Tavares, M.O. Noor, C.H. Vannoy, W.R. Algar, U.J. Krull*
Rapid On-Chip Transduction of Nucleic Acid Hybridization Using Spatial Profiles of Immobilized Quantum Dots and Fluorescence Resonance Energy Transfer
Anal. Chem. 84 (2012) 312-319

W.R. Algar, K. Susumu, J.B. Delehanty, I.L. Medintz*
Quantum Dots in Bioanalysis: Crossing the Valley of Death
*Anal. Chem. 83 (2011) 8826-8837

F. Morgner, S. Stufler, D. Geißler, I.L. Medintz, W.R. Algar, K. Susumu, M. Stewart, J.B. Blanco-Canosa, P.E. Dawson, N. Hildebrandt*
Terbium to quantum dot FRET bioconjugates for clinical diagnostics: Influence of human plasma on optical & assembly properties
Sensors 11 (2011) 9667-9684

W.R. Algar, D.E. Prasuhn, M.H. Stewart, T. Jennings, J.B. Blanco-Canosa, P.E. Dawson, I.L. Medintz*
The Controlled Display of Biomolecules on Nanoparticles: A Challenge Suited to Bioorthogonal Chemistry
Bioconjugate Chem. 22 (2011) 825-858

K.E. Sapsford, S. Spindel, T. Jennings, G. Tao, R.C. Triulzi, W.R. Algar, I.L. Medintz
Optimizing Two-Color Semiconductor Nanocrystal Immunoassays in Single Well Microtiter Plate Formats
Sensors 11 (2011) 7879-7891

TL Jennings, S.G. Becker-Catania, R.C. Triulzi, G. Tao, B. Scott, K.E. Sapsford, S. Spindel, E. Oh, V. Jain, J.B. Delehanty, D.E. Prashun, K. Boeneman, W.R. Algar, I.L. Medintz
Reactive Semiconductor Nanocrystals for Chemoselective Biolabeling and Multiplexed Analysis
ACS Nano 5 (2011), 5579–5593

W.R. Algar, U.J. Krull*
Interfacial Chemistry and the Design of Solid-Phase Nucleic Acid Hybridization Assays Using Immobilized Quantum Dots as Donors in Fluorescence Resonance Energy Transfer
Sensors 11 (2011) 6214–6236

K. Susumu, E. Oh, J.B. Delehanty, J.B. Blanco-Canosa, B.J. Johnson, V. Jain, W.J. Hervey, W.R. Algar, K. Boeneman, P.E. Dawson, I.L. Medintz
Multifunctional Compact Zwitterionic Ligands for Preparing Robust Biocompatible Semiconductor Quantum Dots and Gold Nanoparticles
J. Am. Chem. Soc. 133 (2011) 9480-9496

W.R. Algar, U.J. Krull*
Characterization of the Adsorption of Oligonucleotides on Mercaptopropionic Acid-Coated CdSe/ZnS Quantum Dots Using Fluorescence Resonance Energy Transfer
J. Col. Inter. Sci. 359 (2011) 148-154

A.J. Tavares, M.O. Noor, W.R. Algar, C.H. Vannoy, L. Chen, U.J. Krull*
Toward an On-chip Multiplexed Nucleic Acid Hybridization Assay Using Immobilized Quantum Dot-Oligonucleotide Conjugates and Fluorescence Resonance Energy Transfer
Proc. SPIE 7909 (2011) 79090X

A.J. Tavares, L. Chong, E. Petryayeva, W.R. Algar, U.J. Krull*
Quantum dots as contrast agents for in vivo tumor imaging: progress and issues
Anal. Bioanal. Chem. 399 (2011) 2331-2342

W.R. Algar, U.J. Krull*
Immobilization of CdSe/ZnS quantum dots on glass beads for the detection of nucleic acid hybridization using fluorescence resonance energy transfer
Proc. SPIE 7909 (2011) 79090C

W.R. Algar, U.J. Krull
Promoting Active Learning: The ‘Self-Assembly’ of Model Analytical Instruments
J. Chem. Ed. 87 (2010) 942–944

L. Chen, W.R. Algar, A.J. Tavares, U.J. Krull*
Toward a solid-phase nucleic acid hybridization assay within microfluidic channels using immobilized quantum dots as donors in fluorescence resonance energy transfer
Anal. Bioanal. Chem. 399 (2010) 133-141

W.R. Algar, A.J. Tavares, U.J. Krull*
Beyond labels: A review of the application of quantum dots as integrated components of assays, bioprobes, and biosensors utilizing optical transduction
Anal. Chim. Acta 673 (2010) 1-25

W.R. Algar, U.J. Krull*
New Opportunities in Multiplexed Bioanalyses Using Quantum Dots and Donor-Acceptor Interactions
Anal. Bioanal. Chem. 398 (2010) 2439–2449

W.R. Algar, U.J. Krull*
Developing Mixed Films of Immobilized Oligonucleotides and Quantum Dots for the Multiplexed Detection of Nucleic Acid Hybridization Using a Combination of Fluorescence Resonance Energy Transfer and Direct Excitation of Fluorescence
Langmuir 26 (2010) 6041-6047

W.R. Algar, U.J. Krull*
The Multiplexed Interfacial Transduction of Nucleic Acid Hybridization Using a Single Color of Immobilized Quantum Dot Donor and Two Acceptors in Fluorescence Resonance Energy Transfer
Anal. Chem. 82 (2010) 400-405

A.J. Tavares, E. Petryayeva, L. Chen, W.R. Algar, U.J. Krull*
Toward a Hybridization Assay Using Fluorescence Resonance Energy Transfer and Quantum Dots Immobilized in Microfluidic Channels
Proc. SPIE 7750 (2010) 775003

W.R. Algar, U.J. Krull*
FRET-Based Solid-Phase Three-Colour and Four-Colour Hybridization Assays Using Mixed Films of Quantum Dots and Oligonucleotides
Mater. Res. Soc. Symp. Proc. 1241E (2010) 1241-XX09-04

W.R. Algar, M. Massey, U.J. Krull*
Assembly of a Modular Fluorimeter and Associated Software: Using LabVIEW in an Advanced Undergraduate Analytical Chemistry Laboratory
J. Chem. Ed. 86 (2009) 68-71

W.R. Algar, U.J. Krull*
Toward A Multiplexed Solid-Phase Hybridization Assay Using Quantum Dots as Donors in Fluorescence Resonance Energy Transfer
Anal. Chem. 81 (2009) 4113-4120

W.R. Algar, M. Massey, U.J. Krull*
The application of quantum dots, gold nanoparticles and molecular switches to optical nucleic-acid diagnostics
Trends Anal. Chem. 28 (2009) 292-306

W.R. Algar, U.J. Krull*
Interfacial Transduction of Nucleic Acid Hybridization Using Immobilized Quantum Dots as Donors in Fluorescence Resonance Energy Transfer
Langmuir 25 (2009) 633-638

W.R. Algar, M.B. Prigozhin, B. Liu, U.J. Krull, C.C. Gradinaru
Development of Methods to Study the Conformational Dynamics of Quantum Dot-Oligonucleotide Conjugates by Single Molecule Spectroscopy
Proc. SPIE 7386 (2009) 73860J

W.R. Algar, U.J. Krull*
Multidentate Surface Ligand Exchange for the Immobilization of CdSe/ZnS Quantum Dots and Surface Quantum Dot-Oligonucleotide Conjugates
Langmuir 24 (2008) 5514-5520

W.R. Algar, U.J. Krull*
Quantum Dots as Donors in Fluorescence Resonance Energy Transfer (FRET) for the Bioanalysis of Nucleic Acids, Proteins, and Other Biological Molecules
*Anal. Bioanal. Chem. 391 (2008) 1609-1618

M.B. Prigozhin, P. Shiwsankar, W.R. Algar, U.J. Krull*
Porous silicon: electrochemical microstructuring, photoluminescence and covalent modification
Proc. SPIE 7099 (2008) 70991A

W.R. Algar, Y. Zhou, J. Zeng, U.J. Krull*
Towards Quantum Dot and FRET-Based Optical DNA Biosensor Technology: Surface Chemistry and Photoluminescence of CdSe/ZnS and Si Quantum Dots
Proc. SPIE 6796 (2007) 67960Q

W.R. Algar, U.J. Krull*
Luminescence and Stability of Aqueous Thioalkyl Acid Capped CdSe/ZnS Quantum Dots Correlated to Ligand Ionization
Chem. Phys. Chem. 8 (2007) 561-568

W.R. Algar, U.J. Krull*
Towards Multi-Colour Strategies for the Detection of Oligonucleotide Hybridization using Quantum Dots as Energy Donors in Fluorescence Resonance Energy Transfer
Anal. Chim. Acta 583 (2007) 193-201

W.R. Algar, U.J. Krull*
Adsorption and Hybridization of Oligonucleotides on Mercaptoacetic Acid Capped CdSe/ZnS Quantum Dots and Quantum Dot-Oligonucleotide Conjugates
Langmuir 22 (2006) 11346–11352

W.R. Algar^, M. Massey^, U.J. Krull*
Fluorescence Resonance Energy Transfer and Complex Formation between Thiazole Orange and Various Dye-DNA Conjugates: Implications in Signaling Nucleic Acid Hybridization
J. Fluoresc. 15 (2006) 555–567

M. Massey^, W.R. Algar^, U.J. Krull*
Fluorescence Resonance Energy Transfer (FRET) for DNA Biosensors: FRET Pairs and Förster Distances For Various Dye-DNA Conjugates
Anal. Chim. Acta. 568 (2006) 181–189

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